Growth of GenBank
Entrez
PubMed
UniProt
ExPASy
Predictions from protein sequences:
Secondary Structure Prediction
Pole
PredictProtein
TopPred (transmembrane segments) TopPred (transmembrane segments)
PROFtmb (transmembrane beta strands)
WoLF PSORT
PSORT-B
SubLoc
TargetP
AGADIR
Protein famiilies
Pfam
PROSITE
PRINTS
InterPro
Conserved Domains Database
Sequence alignment and database search:
Dotlet Repeats Conserved protein domains Low complexity region
Lalign
needle SSEARCH PRSS shuffle
BLAST EMBnet blastp Ensembl CDD
FASTA
ExPASy BLAST ClustalW e Jalview
Protein structure databases:
Protein Data Bank
Molecules To Go
PDBsum
Protein Movement
Structural modeling:
Swiss-PdbViewer (Program P00533.fasta 2R4B.pdb )
SWISS-MODEL
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Databases of nucleotide sequences
UniProt
Enzyme nomenclature
PIR
Genome Browser by UCSC
Some specialized databases:
Online Mendelion Inheritance in Man (OMIM)
Biomolecular Interaction Network Database
Gateway to databases
Entrez
Seqeunce Retrievel System
Protein Information Resource (PIR)
Protein Information Resource (PIR)
Ensembl
EVA
Structural comparison
DALI
CE