Library References for Exam 2

To retrieve materials on reserve, look them up in "Merlin"
Reserve materials "By Professor" is easiest since I am the only Starling in the system.
If you want to look up materials "By Course", type "UMS TJ Biol 3622" or "Cell Structure and Function".

Articles online
Some documents are accessible online via the electronic journals available to the library.
The quality of the online article formats varies: Some journals make articles available only as HTML (web) files.  Others offer both rapidly displaying HTML files and much more readable pdf files that are images of the published journal pages.
Goto:   Libraries, Databases, Find Journal Name.   Select "Title begins with" (NOT "Title equals"!) in the left box and enter journal name in the right box.
Typically journal issues online date back to the mid 1990s, or earlier, although many journals restrict accessibility to recent issues (for between 3 months and 1 year.
For decent pdf files of articles from Science, try the link to "Highwire Press ".

  7.   Gene Expression

• Ferbitz, L.,   T. Mier,   H. Patzelt,   B. Bukau,   E. Deuerling,   &   N. Ban.   2004.   Trigger factor in complex with the ribosome forms a molecular cradle for nascent proteins.   Nature 431: 590-596.
• Horwich, A.   2004.   Sight at the end of the tunnel. (News and Views article.)  Nature 431: 520-522.
• Marquez, V.,   D. N. Wilson,   W. P. Tate,   F. Triana-Alonso,   & K. H. Nierhaus.   2004.   Maintaining the ribosomal reading frame: the influence of the E site during translational regulation of release factor 2.   Cell 118: 45-55.
• Schubert, U.,   L. C. Anton,   J. Gibbs,   C. C. Norbury,   J. W. Yewdell   &   J. R. Bennink.  2000.   Rapid degradation of a large fraction of newly synthesized proteins by proteasomes.   Nature 404: 770-774.
• van den Berg, B.,   W. M. Clemons, Jr.,   I. Collinson,   Y. Modis,   E. Hartmann,   S. G. Harrison &  T. A. Rapoport   2004.   X-rey structure of a protein conducting-channel.   Nature 427: 36 - 44.   (Added 25 February 2006.   Not on reserve.   Available on line.)
• Wickner, S.,   M. R. Maurizi   &  S. Gottesman.   1999.   Posttranslational quality control: Folding, refolding, and degrading proteins.   Science 286: 1888- 1893.

  8.   Secretory Pathway: RER & Golgi

• Anderson, D. & P. Walter.   1999.   Blobel's Nobel: a vision validated.   Cell 99: 557-558.
• Driessen, A. J. M.   2005.   Twp pores better than one?   Nature 438: 299 - 300.
• Mitra, K.,   C. Schaffitzel,   T. Shaikh,   F. Tama, & S. Jenni,   C. L. Brooks III,   N. Ban,   &  J. Frank.   2005.   Structure of the E. coli protein-conducting channel bound to a translating ribosome.   Nature 438: 318 - 324.
• Halic, M.,   T. Becker,   M. R. Pool,   C. M. T. Spahn,   R. A. Grassucci,   J. Frank,   &   R. Beckmann.   Structure of the signal recognition particle interacting with the elongation-arrested ribosome.   Nature 427: 808 - 814.   (Author's name may be misspelled "Hallc" in references for reserve articles in library.)
• Hessa, T.,   H. Kim,   K. Bihimaier,   C. Lundlin,   J. Boekel,   H. Andersson,   I-M. Nilsson,   S. H. White,   &   G. von Heijne.   2005.   Recognition of transmembrane helices by the endoplasmic reticulum translocon.   Nature 433: 377 - 381.
• Palade, George.   1975.   Intracellular aspects of the process of protein synthesis.   Science 189: 347-358. (Nobel Prize acceptance address)
• Pool, M. R.,   J. Stumm,   T. A. Fulga,   I. Sinning.   &   B. Dobberstein.   2002.   Disinct Modes of Signal Recognition Particle Interaction with the Ribosome.   Science 297: 1345 - 1352.

  9.   Vesicular Traffic

• Behnia, R.   &   S. Munro.   2005.   Organelle identity and the signposts for membrane traffic.   Nature 438: 597 - 604.
• Innerarity, T. L.   2002.   LDL Receptor's beta-Propeller Displaces LDL.   Science 298: 2337 - 2338.
• Rudenko, G.,   L. Henry,   K. Henderson,   K. Ichtchenko,   M. S. Brown,   J. L. Goldstein,   &   J. Deisenhofer.   2002.   Structure of the LDL Receptor Extracellular Domain at Endosomal pH.   Science 298: 2353 - 2358.
• Stagg,; S. M.,   C.Gurkan,   D. M. Fowler,   P. LaPointe,   T. R. Foss,  C. S. Potter,   B. Carragher,   &   W. E. Balch   2006.   Structure of the Sec13/31 COPII coat cage.   Nature 439: 234-238. (Added 17 March 2006.   Not on reserve.   Available on line.)

  10.   Cytoplasmic Protein Targeting

• Chacinska, A.,   M. Lind,   A. E. Frazier,   J. Ducek,   C. Meisinger, A. Geissler,   A. Scikmann,   H. E. Meyer,   L. N. Truscott,   B. Gulard,   N. Pfanner   &   P. Rehling.   2005.   Mitochondrial Presequence Translocase: Switching between TOM Tethering and Motor Recruitment Involves Tim21 and Tim17.   Cell 120: 817-829.   (Journal is also accessible from campus computers online through libraries.)
• Geuze, H. J.,   J. L. Murk,   A. K. Stroobants,   J. M. Griffith,   M. J. Kleijmeer,   A. J. Koster,   A. J. Verkleij,   B. Distel,   &   H. F. Tabak.  2003.   Involvement of the Edoplasmic Reticulum in Peroxisome Formation.   Molecular Biology of the Cell 14: 2900 - 2907.   (Journal is accessible from campus computers online through libraries.)
• Lodish, H.,   A. Beck,   S. L. Zipursky,   P. Matsudaira,   Baltimore, D.   &   J. Darnell.   2000.   Molecular Cell Biology, 4^th ed. Scientific American Books. pp. 428-435; 689-691. Fig. 17-2.

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