2007

Preston, J. C., and E. A. Kellogg. 2007. Conservation and divergence of APETALA1/FRUITFULL-like gene function in grasses: evidence from gene expression analyses. Plant Journal: in press.

Whipple, C. J., M. Zanis, E. A. Kellogg, and R. J. Schmidt. 2007. Conservation of B class MADS-box gene expression in the second whorl of a basal grass and outgroups links the origin of lodicules and petals. Proceedings of the National Academy of Science, USA 104: 1081-1086. [Selected by Faculty of 1000, Plant Biology, March 9, 2007.]

Ilic, K., E. A. Kellogg, P. Jaiswal, F. Zapata, P. F. Stevens, L. P. Vincent, S. Avraham, L. Reiser, A. Pujar, M. M. Sachs, N. T. Whitman, S. R. McCouch, M. L. Schaeffer, D. H. Ware, L. D. Stein, and S. Y. Rhee. 2006. Plant structure ontology. Unified vocabulary of anatomy and morphology of a flowering plant. Plant Physiology 143: 587-599.

Sanchez-Ken, J. G., L. G. Clark, E. A. Kellogg, and E. E. Kay. 2007. Reinstatement and emendation of subfamily Micrairoideae (Poaceae). Systematic Botany 32: 71-80.

Doust, A. N., A. M. Penly, S. W. L. Jacobs, and E. A. Kellogg. 2007. Congruence, conflict and polyploidization shown by nuclear and chloroplast markers in the monophyletic Òbristle cladeÓ (Paniceae, Panicoideae, Poaceae). Systematic Botany: in press.

McSteen, P., S. Malcomber, A. Skirpan, C. Lunde, X. Wu, E. Kellogg, and S. Hake. 2007. barren inflorescence2 encodes a co-ortholog of the PINOID serine/threonine kinase and is required for organogenesis during inflorescence and vegetative development in maize. Plant Physiology: in press.

Ortiz, R. D. C., E. A. Kellogg, and H. Van der Werff. Molecular phylogeny of the moonseed family (Menispermaceae). Implications for morphological diversification. American Journal of Botany: in press.

Judd, W. S., C. S. Campbell, E. A. Kellogg, P. F. Stevens, and M. J. Donoghue. 2007. Plant Systematics: A phylogenetic approach. 3rd edition. Sinauer Associates: Sunderland, MA.

Kellogg, E. A. 2007. Floral displays: genetic control of grass inflorescences. Current Opinion in Plant Biology 10: 26-31.

2006

Kellogg, E. A. 2006. Progress and challenges in studies of the evolution of development. Journal of Experimental Botany 57: 3505-3516.

Pujar, A., P. Jaiswal, E. A. Kellogg, K. Ilic, L. Vincent, S. Avraham, P. Stevens, F. Zapata, L. Reiser, S. Y. Rhee, M. M. Sachs, M. Schaeffer, L. Stein, D. Ware, and S. McCouch. 2006. Whole plant growth stage ontology for angiosperms and its application in plant biology. Plant Physiology 142: 414-428.

Preston, J. C. and E. A. Kellogg. 2006. Reconstructing the evolutionary history of paralogous APETALA1/FRUITFULL-like genes in grasses (Poaceae). Genetics 174: 421-437.

Doust, A. N., and E. A. Kellogg. 2006. Genotype-environment interactions for branching in the weed green millet (Setaria viridis) and the crop foxtail millet (S. italica)(Poaceae). Molecular Ecology 15: 1335-1349.

Beilstein, M. A., I. A. Al-Shehbaz, and E. A. Kellogg. 2006. Brassicaceae phylogeny and trichome evolution. American Journal of Botany 93: 607-619. [Faculty of 1000, Plant Biology, #7 of Top 10 most viewed citations, May 1, 2006.]

Al-Shehbaz, I. A., M. A. Beilstein, and E. A. Kellogg. 2006. Systematics and phylogeny of the Brassicaceae (Cruciferae): an overview. Plant Systematics and Evolution 259: 89-120.

Reinheimer, R., S. T. Malcomber, and E. A. Kellogg. 2006. Distinct roles of the SEPALLATA gene LEAFY HULL STERILE1 in Eleusine indica and Megathyrsus maximus (Poaceae). Evolution and Development 8: 293-303.

Malcomber, S. T., and E. A. Kellogg. 2006. Evolution of unisexual flowers in grasses (Poaceae) and the putative sex-determination gene, TASSELSEED2 (TS2). New Phytologist 170: 885-899.

Bess, E. C., A. N. Doust, G. Davidse, and E. A. Kellogg. Zuloagaea, a new genus of Neotropical grass within the Òbristle cladeÓ (Poaceae: Paniceae). Systematic Botany 31: 656-670.

Malcomber, S. T., J. C. Preston, R. Reinheimer, J. Kossuth, and E. A. Kellogg. 2006. Developmental gene evolution and the origin of grass inflorescence diversity. Advances in Botanical Research 44: 425-481.

Kellogg, E. A. 2006. Beyond taxonomy: prospects for understanding morphological diversity in the grasses (Poaceae). Darwiniana 44: 7-17.

Leebens-Mack, J., T. Vision, E. Brenner, J. E. Bowers, S. Cannon, M. J. Clement, C. W. Cunningham, C. dePamphilis, R. deSalle, J. J. Doyle J. A. Eisen, X. Gu, J. Harshman, E. A. Kellogg, E. V. Koonin, H. Philippe, J. C. Pires, Y.-L. Qiu, S. Y. Rhee, K. Sjšlander, D. E. Soltis, P. S. Soltis, P. Stevens, D. W. Stevenson, T. Warnow, and C. Zmasek. 2006. Taking the first steps towards a standard for reporting on phylogenies: minimal information about a phylogenetic analysis (MIAPA). OMICS 10: 231-237.

Kellogg, E. A. 2006. The difference between simple and compound leaves. Nature Genetics 38: 865-866.

2005

Gadberry, M. D., S. T. Malcomber, A. N. Doust, and E. A. Kellogg. 2005. Primaclade: a web-based program for designing primers from multiple alignments. Bioinformatics 21: 1263-1264.

Doust, A. N., K. M. Devos, M. Gadberry, M. D. Gale, and E. A. Kellogg. 2005. The genetic basis for inflorescence variation between foxtail and green millet (Poaceae). Genetics 169: 1659-1672.

Bess, E. C., A. N. Doust, and E. A. Kellogg. 2005. A naked grass in the "bristle clade": a phylogenetic and developmental study of Panicum section Bulbosa (Paniceae: Poaceae). International Journal of Plant Sciences 166: 371-381.

Rudall, P. J., W. Stuppy, J. Cunniff, E. A. Kellogg, and B. G. Briggs. 2005. Evolution of reproductive structures in grasses (Poaceae) inferred by sister-group comparison with their putative closest living relatives, Ecdeiocoleaceae. American Journal of Botany 92: 1432-1443.

Malcomber, S. T., and E. A. Kellogg. 2005. SEPALLATA gene diversification: brave new whorls. Trends in Plant Science 10: 427-435.

Jaiswal, P., S. Avraham, K. Ilic, E. A. Kellogg, S. McCouch, A. Pujar, L. Reiser, S. Y Rhee, M. M. Sachs, M. Schaeffer, L Stein, D. Ware. 2005. Plant Ontology: a controlled vocabulary of plant structure and growth stages. Computational and Functional Genomics 6: 388-397.

2004

Doust, A. N., K. M. Devos, M. Gadberry, M. D. Gale, and E. A. Kellogg. 2004. Branching in grasses: genetic control in foxtail millet differs from maize prediction. Proceedings of the National Academy of Sciences, USA 101: 9045-9050.

Doust, A.N. and A.N. Drinnan. 2004. Floral development and molecular phylogeny support the generic status of Tasmannia (Winteraceae). American Journal of Botany 91: 321-331.

Fischer, E., I. Theisen, and L.G. Lohmann. In press. Bignoniaceae. In: The families and genera of vascular plants, Vol VII. Kadereit (ed.), Springer-Verlag Heidelberg, Germany.

Kellogg, E. A. 2004. Evolution of developmental traits. Current Opinion in Plant Biology 7: 92-98.

Kellogg, E. A., and J. L. Bennetzen. 2004. The evolution of nuclear genome structure in plants. American Journal of Botany 91: 1709-1725.

Kellogg, E. A., K. M. Hiser, and A. N. Doust. 2004. Taxonomy, phylogeny, and inflorescence development of the genus Ixophorus (Panicoideae: Poaceae).International Journal of Plant Sciences: 1089-1105.

Lohmann, L.G. 2004. Bignoniaceae. In: Flowering Plants of the Neotropics, N. Smith, S. A. Mori, A. Henderson, D. Wm. Stevenson, and V. Heald (eds.), 51-53. Princeton University Press: Princeton, NJ.

Malcomber, S. T., and E. A. Kellogg. 2004. Heterogeneous expression patterns of the SEPALLATA-like gene LEAFY HULL STERILE1 (LHS1) in grasses (Poaceae) suggests separate roles in meristem determinacy, palea/lemma identity, and flower sexuality. Plant Cell 16: 1692-1706.

Razafimandimbison, S. G., E. A. Kellogg, and B. Bremer. 2004. Recent origin and phylogenetic implications of high-level ITS polymorphisms: a case study from Naucleae (Rubiaceae). Systematic Biology 53 (2): 177-192.

Sweeney, P. W., J. C. Bradford, and P. P. Lowry II. 2004. Phylogenetic position of the New Caledonian endemic Hooglandia (Cunoniaceae) as determined by maximum parsimony analysis of chloroplast DNA. Annals of the Missouri Botanical Garden 91 (2), in press.